Insertion junction: CLIP2.017508_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017508
Chromosome:chromosome 3
Location:7712410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203650 (1 of 1) IPR009072//IPR013785 - Histone-fold // Aldolase-type TIM barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACACCCTCACTCCTGGCACAGGCCTTTCGCCACCTGCTCTCCTGAGT
Internal bar code:AAAAAATGACCTTTCGTCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3447
LEAP-Seq percent confirming:98.2759
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGATGGGGATCAGACTG
Suggested primer 2:CAGCACAGGGGCAAAGAAAC