Insertion junction: CLIP2.017509_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017509
Chromosome:chromosome 16
Location:1565763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAACTTGGCACTGCGAAAACACGTTCGGAAGGGTTGCCTTCGTCGCGC
Internal bar code:ATTTAAAAGAGAGCCCCCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2198
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGCACCGAAAACAACTG
Suggested primer 2:CGGTGTATCCTGAGTTCCCG