Insertion junction: CLIP2.017512_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017512
Chromosome:chromosome 3
Location:7524712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205350 EXN8 (1 of 7) IPR002562//IPR012337 - 3'-5' exonuclease domain // Ribonuclease H-like domain; 3'-5' exonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGCGGGGCGGCTGCCGCCGCTGAGGGTGCAGCGGTGGGCGGCGCAG
Internal bar code:ACCTTCGTACTCCCTAGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTAACACACGCACACGCA
Suggested primer 2:GGTTACTCGAGCTGCCGTAC