Insertion junction: CLIP2.017516_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017516
Chromosome:chromosome 2
Location:1672421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085650 (1 of 1) K03424 - TatD DNase family protein (tatD) 3'UTR
Cre02.g085701 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATGAAGGACATCGGTGTTCGCGCGACCGTGTTGGTTCTGTACGCTTC
Internal bar code:CATTTTATGTGAAAACTTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3807
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACTGCAGTTTCAAGGG
Suggested primer 2:CCGCGGGTAGTAGTGATGAC