Insertion junction: CLIP2.017520_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017520
Chromosome:chromosome 3
Location:1613158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152550 (1 of 1) IPR000104//IPR001680//IPR011041//IPR015943//IPR017986//IPR020472//IPR027417 - Antifreeze protein, type I // WD40 repeat // Soluble quinoprotein glucose/sorbosone dehydrogenase // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGAGTGCGTATGTGCGTGTGTGGGTTTGCGGATTGTGTGCGCGCAGC
Internal bar code:GGCGATTCTGTCCATCCGACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2889
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCCCTGGTAAGCCAACT
Suggested primer 2:AGTAGGAGGAGGAGGAGGGA