Insertion junction: CLIP2.017534_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017534
Chromosome:chromosome 4
Location:3290272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226850 ASP1 (1 of 1) 3.4.23.5 - Cathepsin D; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTTGTTGGTGGGGTGGTGGGGGCGGGTGTCGGACCCGGACTCTCACC
Internal bar code:TTGTTGAACAATCTCGACCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1013
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGTCTTGCTCTTGGCTGC
Suggested primer 2:CTACAGGCCTTGCTTCGGAA