Insertion junction: CLIP2.017535_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017535
Chromosome:chromosome 12
Location:4632776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522100 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTTGCAAGCACAATGTTGTCAATGTGCAACAGCAACCTGTGCGAGCGA
Internal bar code:AAGCTGGGAACGAGCTTCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:546
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCTATGTCTCTCGCCCG
Suggested primer 2:CTTGTGCGCCTCATCAATGG