Insertion junction: CLIP2.017536_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017536
Chromosome:chromosome 16
Location:6128403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677150 (1 of 2) 2.4.1.122 - Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTACCCCAAATGCCCAATCACATACGGTAACCACTTCCCTTCCGCCC
Internal bar code:CTCTGTAAGTCGTGCGGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4534
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCGCTCGATCCTACCAT
Suggested primer 2:GCAACCCAGTTAGCCTGTCT