Insertion junction: CLIP2.017543_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017543
Chromosome:chromosome 3
Location:1344517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150700 (1 of 2) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCTTTAACACACACACACACACACACACATATACACACACACACATA
Internal bar code:AGCATACTGGTCCGCTTGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3870
LEAP-Seq percent confirming:97.3451
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCATTATGCCGTGCAG
Suggested primer 2:CGCGCTAACATGTTCCTTCG