Insertion junction: CLIP2.017544_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017544
Chromosome:chromosome 12
Location:8141832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552150 (1 of 1) PF00069//PF13185 - Protein kinase domain (Pkinase) // GAF domain (GAF_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCGGGCGGTTGCGCCGTGCAGGGGAGGCCTCCTGTGCAGGCGGGCC
Internal bar code:TCGATGTTTGTGAGAGGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCACATGTAGCAGTGA
Suggested primer 2:CCATGGCTAGCGAACCGTAT