Insertion junction: CLIP2.017544_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017544
Chromosome:chromosome 12
Location:8141848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552150 (1 of 1) PF00069//PF13185 - Protein kinase domain (Pkinase) // GAF domain (GAF_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCTTGAACAGGACAACTTTGAACGGACTGGGACGGACGACTCCAAC
Internal bar code:AGAGGCAACTGTCCCGGAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:73
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGCTAGCGAACCGTAT
Suggested primer 2:ACACGCACATGTAGCAGTGA