Insertion junction: CLIP2.017554_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017554
Chromosome:chromosome 15
Location:5316225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g734516 RPN9 (1 of 1) K03039 - 26S proteasome regulatory subunit N9 (PSMD13, RPN9); 26S proteasome regulatory subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGGACCGCGTTTCAAGGTTGCGGACATGTCGGACAAGGTGTTATTTT
Internal bar code:CCTAATGTGCGGAGCGGTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2350
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCATTCTTTCAGGCCG
Suggested primer 2:CGTAGAGGCGTGTTTCCTGT