Insertion junction: CLIP2.017554_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017554
Chromosome:chromosome 15
Location:5316402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g734516 RPN9 (1 of 1) K03039 - 26S proteasome regulatory subunit N9 (PSMD13, RPN9); 26S proteasome regulatory subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCTCAATCAGTAGCTGCTGCAGTCCGTGAAACACTTTAATCGATCAT
Internal bar code:CCTAATGTGCGGAGCGGTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGAGGCGTGTTTCCTGT
Suggested primer 2:CATCGCATTCTTTCAGGCCG