Insertion junction: CLIP2.017555_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017555
Chromosome:chromosome 7
Location:811926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318250 HLM12 (1 of 2) IPR001214//IPR019734 - SET domain // Tetratricopeptide repeat; Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCATTGTGGCAAACAAGCCCCGGCCCCTCCAGGCAAGCTCCTTGCGT
Internal bar code:TAGAGCGCCTATTTGCATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4150
LEAP-Seq percent confirming:98.6842
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCAGAAGGGAATTCGGT
Suggested primer 2:TCCAATGCACTCACCAGGAC