Insertion junction: CLIP2.017555_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017555
Chromosome:chromosome 7
Location:811928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318250 HLM12 (1 of 2) IPR001214//IPR019734 - SET domain // Tetratricopeptide repeat; Histone-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGGTGGGCCAGCTCAGGCTGCGGGACAGCAGCCCGGCGCACGTTGTT
Internal bar code:TGTTCCACTAGGATAAATCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2596
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAATGCACTCACCAGGAC
Suggested primer 2:CGAGCAGAAGGGAATTCGGT