Insertion junction: CLIP2.017570_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017570
Chromosome:chromosome 11
Location:1366704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCCCTAAGAAGTTCAACTACTTGAGGCACAGGCCGAGCGCCGGGAT
Internal bar code:GTTATGGTACACTCTGGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCTGATCACGTTTGCCC
Suggested primer 2:GCGCCTTAGTCATCTGGTCC