Insertion junction: CLIP2.017573_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017573
Chromosome:chromosome 7
Location:3377822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335100 (1 of 5) IPR011051//IPR013096 - RmlC-like cupin domain // Cupin 2, conserved barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAGATAAAAAGCCCTGCTCACTTGCGCTACCGCCCCACGTGGCGCGG
Internal bar code:GTAATCGTAAAACTAAAACCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3583
LEAP-Seq percent confirming:98.3193
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGACCGTCACCTGAAACA
Suggested primer 2:CGACGAAAGGCTGCATAACG