Insertion junction: CLIP2.017578_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017578
Chromosome:chromosome 3
Location:3900945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170700 (1 of 3) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACCTTTGAACCCAGTTGCCCTCTTTCCCCACATCCTGTGCATGCACA
Internal bar code:TAACGTGGTAAGGTAGTGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAGGCGACAGAACAAGA
Suggested primer 2:TGGTGCCGCTTGGTAAGATT