Insertion junction: CLIP2.017581_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017581
Chromosome:chromosome 12
Location:135522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g484250 DHC1,IA1-DHC1alpha,IDA1,ROC34,PF9 (1 of 1) PTHR10676//PTHR10676:SF135 - DYNEIN HEAVY CHAIN FAMILY PROTEIN // DYNEIN HEAVY CHAIN 10, AXONEMAL; Inner Arm Dynein Heavy Chain 1/f-alpha intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGCACACGTGGATAGCTGGCTCTAGCTGGCGGGCTAGCTAGCTCGAT
Internal bar code:TTCTAATCTCTGGAACGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2639
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGGCATGGTAACGGTA
Suggested primer 2:CATGGAGATCACCGCCTACC