Insertion junction: CLIP2.017599_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017599
Chromosome:chromosome 5
Location:2833885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241250 (1 of 1) IPR000104//IPR000253//IPR001357 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // BRCT domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCCACACGCTACCACGCGCAAGGCCCCGTGCAGGATGTTTTGCGCTT
Internal bar code:GCGAGTCTGGCTTGCCTCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5405
LEAP-Seq percent confirming:98.4375
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGGCTCAGGTGACACAT
Suggested primer 2:TCCAGAGAAGGGCTGCTACT