Insertion junction: CLIP2.017602_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017602
Chromosome:chromosome 7
Location:4369286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341000 (1 of 4) IPR017956//IPR020478 - AT hook, DNA-binding motif // AT hook-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCCAAGCGCGCGGCAGGTTGTGCGGCAGCGGGTGGCGAAGTGGCGGC
Internal bar code:AGTGTAATGTACGACGACTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3266
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTGATTGTTCCTGGCC
Suggested primer 2:CACGGCGCTTCTGTTTCTTC