Insertion junction: CLIP2.017604_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017604
Chromosome:chromosome 13
Location:1987460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576600 Conserved Protein with Similarity to Catalytic domain of Protein Tyrosine Kinases; (1 of 1) PTHR23257//PTHR23257:SF405 - SERINE-THREONINE PROTEIN KINASE // MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACACCCCTACCTGGAACCCCTCCACCAGGTCTTTGAAGCTGGGCCTG
Internal bar code:AGACGGCGCTAGAAGTCGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1274
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTGTGTGGA
Suggested primer 2:CAGCTGCTGTTGTGCCATTG