Insertion junction: CLIP2.017616_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017616
Chromosome:chromosome 1
Location:4098146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027200 UBC12 E2 Ubiquitin conjugating enzyme; (1 of 1) K10576 - ubiquitin-conjugating enzyme E2 H (UBE2H, UBC8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTAGGCCCCAAACCCTTGTGCAGCGACGCCCCCAGCGCAGCTTCCGG
Internal bar code:ATTCATCTTGGACTCATTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:969
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGGTAGCTGTACAGTAG
Suggested primer 2:TTGTGTTGCTGCGGTAAAGC