Insertion junction: CLIP2.017617_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017617
Chromosome:chromosome 12
Location:5991130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534200 (1 of 1) PTHR24365//PTHR24365:SF381 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCATCAGCCGGTCCAGCTGCGCGTGGATCAGCTGGCGTGCGTCGTAGA
Internal bar code:AAGAAATTGCATAAGGAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:932
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGAAGAGCACGGTCCAA
Suggested primer 2:AACAGCGGCAAGTACAGGTT