Insertion junction: CLIP2.017623_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017623
Chromosome:chromosome 3
Location:1728358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800300 (1 of 73) IPR000477//IPR005135 - Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCGTCCGCAGTCACATTGTCAAACGCATTCAGTGAGCCATTATAGAG
Internal bar code:AGGGAGGGTGTACACACTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2905
LEAP-Seq percent confirming:8.13953
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:79
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAGTGCTATACCGTGCG
Suggested primer 2:GTCCGAAACGTCACCCTTCT