Insertion junction: CLIP2.017623_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017623
Chromosome:chromosome 3
Location:1728359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800300 (1 of 73) IPR000477//IPR005135 - Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCCATGATTAATAGAAGGCCCGGCGTAGGTACGCGCAGATGGGCAGT
Internal bar code:GCTTGGTGGTTTTATTTGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3211
LEAP-Seq percent confirming:2.77778
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGAAACGTCACCCTTCT
Suggested primer 2:GCAAAGTGCTATACCGTGCG