Insertion junction: CLIP2.017627_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017627
Chromosome:chromosome 9
Location:2402582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393700 MMP3 Matrix metalloproteinase; (1 of 2) IPR016517 - Peptidase M11, autolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGATTTGACATCGGGGCCGCTGGACACCAACACAGGCACCTCTCGCCG
Internal bar code:ATTAGATGATAACGGAATGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:617
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTATGGCCGTATGGGTAA
Suggested primer 2:TGATGAGTCAGTTGCACGCT