Insertion junction: CLIP2.017639_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017639
Chromosome:chromosome 12
Location:2274032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508450 (1 of 1) IPR001680//IPR002893//IPR017986 - WD40 repeat // Zinc finger, MYND-type // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTCGAACACATGAGCTGCATCTCTGTGCGACTCCGTTTCGCCCCACG
Internal bar code:GGGATTACGTCCGACTTCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:851
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAACCCGAATTCAAGCCT
Suggested primer 2:ATCTTGGCGTCACTCTGTGG