Insertion junction: CLIP2.017645_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017645
Chromosome:chromosome 11
Location:822053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467639 (1 of 1) PF04910 - Transcriptional repressor TCF25 (Tcf25) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCCTGCAGGGGACGGGGAAGACAGCGTGTGTTGGACAACCCAAGAA
Internal bar code:TTGCGACCGTCAGCGCGGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2484
LEAP-Seq percent confirming:14.4737
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGCTGTGGGCTAAATCT
Suggested primer 2:GATTCTCCTCCACGCCGTAG