Insertion junction: CLIP2.017649_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017649
Chromosome:chromosome 17
Location:2626796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716600 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTCAGAATATGGTTTGTCAGAGTATGGTTTGTCAGAGTAGTATGCA
Internal bar code:AGCGAGTTAGACGCTGAAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGAGGTGGTACGACAGC
Suggested primer 2:CCAACAAGACCTTTGACGCG