Insertion junction: CLIP2.017666_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017666
Chromosome:chromosome 16
Location:2215376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658200 (1 of 2) IPR003594//IPR024975 - Histidine kinase-like ATPase, C-terminal domain // Domain of unknown function DUF3883 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAAGGTTGGATTGGCAGAGACAGGTGAGGATTCGGTGCATGCCGTGTG
Internal bar code:ATCTCTTAGGGAAGGAACCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:790
LEAP-Seq percent confirming:72.5
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTGACGTCAACCAGAGC
Suggested primer 2:AATCGTTGAGCTCCACTGGG