Insertion junction: CLIP2.017672_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017672
Chromosome:chromosome 2
Location:828576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800173 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCCTGGTGCCAGTGCATTGACTATGACTGCGCCTGCTCACCCTACA
Internal bar code:AGCTGGAGTCATGATCATTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:689
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTTGCCCTTGAGGTTG
Suggested primer 2:ACGCGCCTTTCAAAGCATTT