Insertion junction: CLIP2.017680_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017680
Chromosome:chromosome 9
Location:3549080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396549 (1 of 12) IPR001841//IPR002110//IPR020683 - Zinc finger, RING-type // Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGTCGGTGTCGGGCGGCAGCGTTGACGCCGAGTTGGAGGAGCAGTGC
Internal bar code:AATCCATAAAGCGGCAAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCCTGCATCCATCAAGT
Suggested primer 2:CCTCTCCTTCCTCCAGCTCT