Insertion junction: CLIP2.017690_6

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017690
Chromosome:chromosome 17
Location:4092967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728864 OPR105 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 105 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGCTGTGCTGGACGCGCCTGCCGGGCCGGAGCTGGCGCGGCCGCCGG
Internal bar code:GCGCCGGTACATTTGCTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3010
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACCAGCACTGTCACCTG
Suggested primer 2:GTTTGCGTGTATGGGACGTG