Insertion junction: CLIP2.017693_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017693
Chromosome:chromosome 3
Location:3991199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171550 SSA13 cilia-sensing, structure and/or assembly; (1 of 1) PTHR21706//PTHR21706:SF15 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 65 CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGAGGGGTAGAAGAAGGGGAGGCTCTTCGCAAACTTCCACTTTGCGT
Internal bar code:CCGTCAAAGAGGAGCGGACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2295
LEAP-Seq percent confirming:80.4348
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCTTTTGCCAACTCCG
Suggested primer 2:ACAGGTAGCGATGTGGGTTG