Insertion junction: CLIP2.017695_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017695
Chromosome:chromosome 10
Location:2877673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439600 (1 of 1) PTHR11649//PTHR11649:SF62 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // PROTEIN SEY1 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATTAGGCGAAACTAGGGGGGCCGGGTGGGGGTTGGCGGTATGAGGAA
Internal bar code:CCGGGTCCCAATTTCATGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:446
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCCAAGCCCATAACAGC
Suggested primer 2:TGGCGTTCAAAAAGCACCTG