Insertion junction: CLIP2.017698_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017698
Chromosome:chromosome 8
Location:2505538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372500 (1 of 1) K11373 - elongator complex protein 1 (ELP1, IKI3, IKBKAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCAGCCCAAACTAAACCAAATCGAATCAAAGCAAAAGAGCGAGGGGC
Internal bar code:TCCGGTTCTATAGAGCTTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:953
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACCCAGTCTCCTGACC
Suggested primer 2:ACGAGGAAAGGGGGATAGCT