Insertion junction: CLIP2.017700_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017700
Chromosome:chromosome 11
Location:1972500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467774 (1 of 1) IPR000104//IPR003409 - Antifreeze protein, type I // MORN motif intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAGCCGAGACGGAATCATGCGTCACCCCTCCACCGCGGCGCCGCCG
Internal bar code:ATTAGCCAGTGTTGCTGTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAAAGTGGCCAGTGACGT
Suggested primer 2:CCTTGTTGGCCGTCTCTCTT