Insertion junction: CLIP2.017705_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017705
Chromosome:chromosome 15
Location:2609021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGAGCGACCTTAACGCGCTGCAACAGATATTTTCGCATTACGTGCGA
Internal bar code:TATCGTAGTGACACAACTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1388
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATGCCAAAACCCACCCC
Suggested primer 2:ACATTCCTCCGCAATCTGCA