Insertion junction: CLIP2.017710_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017710
Chromosome:chromosome 1
Location:5730924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041050 AOC6 Cationic amino acid transporter; (1 of 2) K03294 - basic amino acid/polyamine antiporter, APA family (TC.APA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCGGGGGTGGCAACGGGAGGGGGAGGCGGCAGCGGCGGCGGCAGCA
Internal bar code:GGTCGGTCCCGGTGCAGATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTATCTGCGTGTCCGAGCAT
Suggested primer 2:CCCCTCTTTCGCACTGAGTT