Insertion junction: CLIP2.017731_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017731
Chromosome:chromosome 9
Location:1852466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAACGGTGGTGACGCAGGTGGTGAAACCAGCGTTACGCCAAGAGCTG
Internal bar code:AGTTTGTCGATAGATCATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCGTTCTCGAGTAGAGC
Suggested primer 2:ACTTGTATTCCACTGGCGGG