Insertion junction: CLIP2.017740_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017740
Chromosome:chromosome 16
Location:7020166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673729 CPN11 Chaperonin 11, chloroplastic; (1 of 1) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGAATGGCGATAGGGGAGCGTTCGGGCCTGAGCGCGCGTGGCGCGGC
Internal bar code:TCTCTCGTGTCAATTAAGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1543
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAATATCCGCCAGCAAC
Suggested primer 2:ACAGCACCTAGTTTGGGTCG