Insertion junction: CLIP2.017752_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017752
Chromosome:chromosome 2
Location:1099045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080600 BIP2 (1 of 2) K09490 - heat shock 70kDa protein 5 (HSPA5, BIP); Endoplasmic reticulum associated Hsp70 protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGTGCCGCGGGGGGCCGGCGGGATACCGTTCAGGTCGAACTGGCC
Internal bar code:CGAAATTGAGGTCATATTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1891
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGATGGGAGTTTCTGG
Suggested primer 2:CTCCTTGTCCTCCTCCTCGA