Insertion junction: CLIP2.017761_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017761
Chromosome:chromosome 7
Location:2196274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327150 (1 of 2) IPR001810//IPR003347 - F-box domain // JmjC domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAGGGCTGCGGGGCCATGCGGCCAGGGTGGGAGCCACATGGTGCGCC
Internal bar code:TTTGCCATGCACTCGCTGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:568
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGTCGTGCCATGTAGT
Suggested primer 2:AGACAGGGGCTAGCACTGTA