Insertion junction: CLIP2.017768_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017768
Chromosome:chromosome 2
Location:6519967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389001 (1 of 77) IPR001623 - DnaJ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCACGGCTGGCACGGCGGCAGCCGCAGCGGCATCAAATAGCTTGGG
Internal bar code:TCATACGGTCTTATGATTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2117
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCGAAAAAGTGCAGTGT
Suggested primer 2:AGACTGTGCAGGGGTTAAGC