Insertion junction: CLIP2.017788_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017788
Chromosome:chromosome 12
Location:6620647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538900 (1 of 25) PTHR10516 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACAAGGCGAAATGAAAACCCAATCATCATGAAGCCGTGCCCTCCTGT
Internal bar code:GCTGTGTTAAGGAGGTAGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1137
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCCGTACTGTTCGTGA
Suggested primer 2:CCCAGATAACTGCGCCGTAT