Insertion junction: CLIP2.017798_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017798
Chromosome:chromosome 6
Location:6275359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292500 CYN23b,CYN23 Cyclophilin 23; (1 of 1) PTHR11071//PTHR11071:SF17 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGAACAAACCCATTACCCAATCATCTCAAGCCACACCGCCCCCTAAAA
Internal bar code:GGTCAACTTGTGTAAGAGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3300
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCTTCACGTGCCAAAGC
Suggested primer 2:CGGGTAGCAGGTGACATGTT