Insertion junction: CLIP2.017807_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017807
Chromosome:chromosome 13
Location:5099991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606800 (1 of 2) PTHR30336//PTHR30336:SF4 - INNER MEMBRANE PROTEIN, PROBABLE PERMEASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTATGCCGTCAGCCGGCAGGACGAATTCGGGCAGCAGACCATCAGCGA
Internal bar code:GTACTTCATGGGTCATGATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1090
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCCAGACATGTAGCACC
Suggested primer 2:CGTACCCTTCCTCCCGTTTC