Insertion junction: CLIP2.017809_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017809
Chromosome:chromosome 6
Location:5422592
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g285700 (1 of 1) PTHR13466:SF0 - PROTEIN F55C12.5, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATGCGCACCAGCACCGCGTTGAGGCCGTGAAGCCCAGCCACCAGCGC
Internal bar code:GAGTTTTTTCCGCTTTAGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:421
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCATGCTTTGCGTTGCTT
Suggested primer 2:TTCCCTTCCCTTCCCTTCCA