Insertion junction: CLIP2.017812_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017812
Chromosome:chromosome 15
Location:159157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g634600 (1 of 1) PF12796//PF13637//PF13857 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTTCCTCAGCGGCGGCGGCGCCGGAGGCCGCCAAGCTACCTGCACCC
Internal bar code:AAGAGTGGACGGCTACAAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1621
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGGTGTATGACGTGTGT
Suggested primer 2:TCAAGTCTTGCCGCACTGAT